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Sb-PiPLU: A Novel Parametric Activation Function for Deep Learning

Mondal, Ayan; Shrivastava, Vimal K.; Chatterjee, Ayan; Ramachandra, Raghavendra

The choice of activation function—particularly non-linear ones—plays a vital role in enhancing the classification performance of deep neural networks. In recent years, a variety of non-linear activation functions have been proposed. However, many of these suffer from drawbacks that limit the effectiveness of deep learning models. Common issues include the dying neuron problem, bias shift, gradient explosion, and vanishing gradients. To address these challenges, we introduce a new activation function: Softsign-based Piecewise Parametric Linear Unit (Sb-PiPLU). This function offers improved non-linear approximation capabilities for neural networks. Its piecewise, parametric design allows for greater adaptability and flexibility, which in turn enhances overall model performance. We evaluated Sb-PiPLU through a series of image classification experiments across various Convolutional Neural Network (CNN) architectures. Additionally, we assessed its memory usage and computational cost, demonstrating that Sb-PiPLU is both stable and efficient in practical applications. Our experimental results show that Sb-PiPLU consistently outperforms conventional activation functions in both classification accuracy and computational efficiency. It achieved higher accuracy on multiple benchmark datasets, including CIFAR-10, CINIC-10, MWD, Brain Tumor, and SVHN, surpassing widely-used functions such as ReLU and Tanh. Due to its flexibility and robustness, Sb-PiPLU is particularly well-suited for complex image classification tasks.

IEEE (Institute of Electrical and Electronics Engineers)

2025

Legacy and emerging per- and polyfluoroalkyl substances in eggs of yellow-legged gulls from Southern France

Jouanneau, William; Boulinier, Thierry; Herzke, Dorte; Nikiforov, Vladimir; Gabrielsen, Geir Wing; Chastel, Olivier

More than 70 years of industrial production of per- and polyfluoroalkyl substances (PFAS) have resulted in their ubiquitous presence in the environment on a global scale, although differences in sources, transport and fate lead to variability of occurrence in the environment. Gull eggs are excellent bioindicators of environmental pollution, especially for persistent organic pollutants such as PFAS, known to bioaccumulate in organisms and to be deposited in bird eggs by maternal transfer. Using yellow-legged gull (Larus michahellis) eggs, we investigated the occurrence of more than 30 PFAS, including the most common chemicals (i.e., legacy PFAS) as well as their alternatives (i.e., emerging PFAS) in the Bay of Marseille, the second largest city in France. Compared to eggs from other colonies along the Mediterranean coast, those from Marseille had PFAS concentrations ranging from slightly higher to up to four times lower, suggesting that this area cannot be specifically identified as a hotspot for these compounds. We also found several emerging PFAS including 8:2 and 10:2 FTS, 7:3 FTCA or PFECHS in all collected eggs. Although the scarcity in toxicity thresholds for seabirds, especially during embryogenesis, does not enable any precise statement about the risks faced by this population, this study contributes to the effort in documenting legacy PFAS contamination on Mediterranean coasts while providing valuable novel inputs on PFAS of emerging concern. Identifying exposure in free-ranging species also participate to determine the main target for toxicity testing in wildlife.

Elsevier

2025

New Approach Methods (NAMs) for genotoxicity assessment of nano- and advanced materials; Advantages and challenges

Gutleb, Arno; Murugadoss, Sivakumar; Stepnik, Maciej; SenGupta, Tanima; El Yamani, Naouale; Longhin, Eleonora Marta; Olsen, Ann-Karin Hardie; Wyrzykowska, Ewelina; Jagiello, Karolina; Judzinska, Beata; Cambier, Sebastien; Honza, Tatiana; McFadden, Erin; Shaposhnikov, Sergey; Puzyn, Tomasz; Serchi, Tommaso; Weber, Pamina; Arnesdotter, Emma; Skakalova, Vier; Jirsova, Katerina; Grudzinski, Ireneusz; Collins, Andrew; Rundén-Pran, Elise; Dusinska, Maria

Genotoxicity assessment is essential for ensuring chemical safety and mitigating risks to human health and the environment. Traditional methods, reliant on animal models, are time-consuming, costly, and raise ethical concerns. New Approach Methods (NAMs) offer innovative, cost-effective, and ethical alternatives, playing a pivotal role in both traditional and next-generation risk assessment (NGRA) by minimizing the need for animal testing, particularly in genotoxicity evaluations. However, the development of NAMs often overlooks the particular physicochemical properties of nanomaterials (NMs), which significantly influence their toxicological behaviour and can interfere with genotoxicity evaluation. This underscores an urgent need for the standardization and adaptation of NAMs to address nano- and advanced material-specific genotoxicity challenges. In this review, we summarize the challenges associated with genotoxicity testing of NMs and highlight the suitability of existing in vitro and in silico NAMs for NMs and advanced materials, enabling genotoxicity testing across various exposure routes and organ systems. Despite considerable progress, regulatory validation remains constrained by the absence of approved test guidelines and standardized protocols. To achieve regulatory acceptance, it is crucial to adapt NAMs to NM-specific exposure scenarios, refine test systems to better mimic human biology, develop tailored in vitro protocols, and ensure thorough characterisation of NMs both in pristine form and dispersed in culture medium. Collaborative efforts among scientists, regulators, industry, and advocacy groups are vital to improving the reliability and regulatory acceptance of NAMs. By addressing these challenges, NAMs have the potential to revolutionize genotoxicity risk assessment, advancing it towards a more sustainable, efficient and ethical framework.

2025

Investigating the impact of climate change on PCB-153 exposure in Arctic seabirds with the nested exposure model

Skogeng, Lovise Pedersen; Blévin, Pierre; Breivik, Knut; Bustnes, Jan Ove; Eulaers, Igor; Sagerup, Kjetil; Krogseth, Ingjerd Sunde

At the same time Arctic ecosystems experiences rapid climate change, at a rate four times faster than the global average, they remain burdened by long-range transported pollution, notably with legacy polychlorinated biphenyls (PCBs). The present study investigates the potential impact of climate change on seabird exposure to PCB-153 using the established Nested Exposure Model (NEM), here expanded with three seabird species, i.e. common eider (Somateria mollissima), black-legged kittiwake (Rissa tridactyla) and glaucous gull (Larus hyperboreus), as well as the filter feeder blue mussel (Mytulis edulis). The model's performance was evaluated using empirical time trends of the seabird species in Kongsfjorden, Svalbard, and using tissue concentrations from filter feeders along the northern Norwegian coast. NEM successfully replicated empirical PCB-153 concentrations, confirming its ability to simulate PCB-153 bioaccumulation in the studied seabird species within an order of magnitude. Based on global PCB-153 emission estimates, simulations run until the year 2100 predicted seabird blood concentrations 99% lower than in year 2000. Model scenarios with climate change-induced altered dietary composition and lipid dynamics showed to have minimal impact on future PCB-153 exposure, compared to temporal changes in primary emissions of PCB-153. The present study suggests the potential of mechanistic modelling in assessing POP exposure in Arctic seabirds within a multiple stressor context.

Royal Society of Chemistry (RSC)

2025

An Introduction to prismAId: Open-Source and Open Science AI for Advancing Information Extraction in Systematic Reviews

Boero, Riccardo

prismAId is an open-source tool designed to streamline systematic literature reviews by leveraging generative AI models for information extraction. It offers an accessible, efficient, and replicable method for extracting and analyzing data from scientific literature, eliminating the need for coding expertise. Supporting various review protocols, including PRISMA 2020, prismAId is distributed across multiple platforms – Go, Python, Julia, R – and provides user-friendly binaries compatible with Windows, macOS, and Linux. The tool integrates with leading large language models (LLMs) such as OpenAI’s GPT series, Google’s Gemini, Cohere’s Command, and Anthropic’s Claude, ensuring comprehensive and up-to-date literature analysis. prismAId facilitates systematic reviews, enabling researchers to conduct thorough, fast, and reproducible analyses, thereby advancing open science initiatives.

2025

Hazard characterization of the mycotoxins enniatins and beauvericin to identify data gaps and improve risk assessment for human health

Behr, Anne-Cathrin; Fæste, Christiane Kruse; Azqueta, Amaya; Tavares, Ana M.; Spyropoulou, Anastasia; Solhaug, Anita; Olsen, Ann-Karin Hardie; Vettorazzi, Ariane; Mertens, Birgit; Zegura, Bojana; Streel, Camille; Ndiaye, Dieynaba; Spilioti, Eliana; Dubreil, Estelle; Buratti, Franca Maria; Crudo, Francesco; Eriksen, Gunnar Sundstøl; Snapkov, Igor; Teixeira, João Paulo; Rasinger, Josef; Sanders, Julie; Machera, Kyriaki; Ivanova, Lada; Gaté, Laurent; Le Hegarat, Ludovic; Novak, Matjaz; Smith, Nicola Margareta; Tait, Sabrina; Fraga, Sónia; Hager, Sonja; Marko, Doris; Braeuning, Albert; Louro, Henriqueta; Silva, Maria João; Dirven, Hubert; Dietrich, Jessica

Enniatins (ENNs) and beauvericin (BEA) are cyclic hexadepsipeptide fungal metabolites which have demonstrated antibiotic, antimycotic, and insecticidal activities. The substantial toxic potentials of these mycotoxins are associated with their ionophoric molecular properties and relatively high lipophilicities. ENNs occur extensively in grain and grain-derived products and are considered a food safety issue by the European Food Safety Authority (EFSA). The tolerable daily intake and maximum levels for ENNs in humans and animals remain unestablished due to key toxicological and toxicokinetic data gaps, preventing full risk assessment. Aiming to find critical data gaps impeding hazard characterization and risk evaluation, this review presents a comprehensive summary of the existing information from in vitro and in vivo studies on toxicokinetic characteristics and cytotoxic, genotoxic, immunotoxic, endocrine, reproductive and developmental effects of the most prevalent ENN analogues (ENN A, A1, B, B1) and BEA. The missing information identified showed that additional studies on ENNs and BEA have to be performed before sufficient data for an in-depth hazard characterisation of these mycotoxins become available.

Springer

2025

A scalable framework for harmonizing, standardization, and correcting crowd-sourced low-cost sensor PM2.5 data across Europe

Hassani, Amirhossein; Salamalikis, Vasileios; Schneider, Philipp; Stebel, Kerstin; Castell, Nuria

Citizen-operated low-cost air quality sensors (LCSs) have expanded air quality monitoring through community engagement. However, still challenges related to lack of semantic standards, data quality, and interoperability hinder their integration into official air quality assessments, management, and research. Here, we introduce FILTER, a geospatially scalable framework designed to unify, correct, and enhance the reliability of crowd-sourced PM2.5 data across various LCS networks. FILTER assesses data quality through five steps: range check, constant value detection, outlier detection, spatial correlation, and spatial similarity. Using official data, we modeled PM2.5 spatial correlation and similarity (Euclidean distance) as functions of geographic distance as benchmarks for evaluating whether LCS measurements are sufficiently correlated/consistent with neighbors. Our study suggests a −10 to 10 Median Absolute Deviation threshold for outlier flagging (360 h). We find higher PM2.5 spatial correlation in DJF compared to JJA across Europe while lower PM2.5 similarity in DJF compared to JJA. We observe seasonal variability in the maximum possible distance between sensors and reference stations for in-situ (remote) PM2.5 data correction, with optimal thresholds of ∼11.5 km (DJF), ∼12.7 km (MAM), ∼20 km (JJA), and ∼17 km (SON). The values implicitly reflect the spatial representativeness of stations. ±15 km relaxation for each season remains feasible when data loss is a concern. We demonstrate and validate FILTER's effectiveness using European-scale data originating from the two community-based monitoring networks, sensor.community and PurpleAir with QC-ed/corrected output including 37,085 locations and 521,115,762 hourly timestamps. Results facilitate uptake and adoption of crowd-sourced LCS data in regulatory applications.

Elsevier

2025

Future CH4 as modelled by a fully coupled Earth system model: prescribed GHG concentrations vs. interactive CH4 sources and sinks

Im, Ulas; Tsigaridis, Kostas; Bauer, Susanne; Shindell, Drew; Oliviè, Dirk Jan Leo; Wilson, Simon; Sørensen, Lise Lotte; Langen, Peter; Eckhardt, Sabine

We have used the NASA Goddard Institute for Space Studies (GISS) Earth system model GISS-E2.1 to study the future budgets and trends of global and regional CH4 under different emission scenarios, using both the prescribed GHG concentrations as well as the interactive CH4 sources and sinks setup of the model, to quantify the model performance and its sensitivity to CH4 sources and sinks. We have used the Current Legislation (CLE) and the maximum feasible reduction (MFR) emission scenarios from the ECLIPSE V6b emission database to simulate the future evolution of CH4 sources, sinks, and levels from 2015 to 2050. Results show that the prescribed GHG version underestimates the observed surface CH4 concentrations during the period between 1995 and 2023 by 1%, with the largest underestimations over the continental emission regions, while the interactive simulation underestimates the observations by 2%, with the biases largest over oceans and smaller over the continents. For the future, the MFR scenario simulates lower global surface CH4 concentrations and burdens compared to the CLE scenario, however in both cases, global surface CH4 and burden continue to increase through 2050 compared to present day. In addition, the interactive simulation calculates slightly larger O3 and OH mixing ratios, in particular over the northern hemisphere, leading to slightly decreased CH4 lifetime in the present day. The CH4 forcing is projected to increase in both scenarios, in particular in the CLE scenario, from 0.53 W m−2 in the present day to 0.73 W m−2 in 2050. In addition, the interactive simulations estimate slightly higher tropospheric O3 forcing compared to prescribed simulations, due to slightly higher O3 mixing ratios simulated by the interactive models. While in the CLE, tropospheric O3 forcing continues to increase, the MFR scenario leads to a decrease in tropospheric O3 forcing, leading to a climate benefit. Our results highlight that in the interactive models, the response of concentrations are not necessarily linear with the changes in emissions as the chemistry is non-linear, and dependent on the oxidative capacity of the atmosphere. Therefore, it is important to have the CH4 sources and chemical sinks to be represented comprehensively in climate models.

IOP Publishing

2025

Unchanged PM2.5 levels over Europe during COVID-19 were buffered by ammonia

Evangeliou, Nikolaos; Tichý, Ondřej; Otervik, Marit Svendby; Eckhardt, Sabine; Balkanski, Yves; Hauglustaine, Didier A.

The coronavirus outbreak in 2020 had a devastating impact on human life, albeit a positive effect on the environment, reducing emissions of primary aerosols and trace gases and improving air quality. In this paper, we present inverse modelling estimates of ammonia emissions during the European lockdowns of 2020 based on satellite observations. Ammonia has a strong seasonal cycle and mainly originates from agriculture. We further show how changes in ammonia levels over Europe, in conjunction with decreases in traffic-related atmospheric constituents, modulated PM2.5. The key result of this study is a −9.8 % decrease in ammonia emissions in the period of 15 March–30 April 2020 (lockdown period) compared to the same period in 2016–2019, attributed to restrictions related to the global pandemic. We further calculate the delay in the evolution of the ammonia emissions in 2020 before, during, and after lockdowns, using a sophisticated comparison of the evolution of ammonia emissions during the same time periods for the reference years (2016–2019). Our analysis demonstrates a clear delay in the evolution of ammonia emissions of −77 kt, which was mainly observed in the countries that imposed the strictest travel, social, and working measures. Despite the general drop in emissions during the first half of 2020 and the delay in the evolution of the emissions during the lockdown period, satellite and ground-based observations showed that the European levels of ammonia increased. On one hand, this was due to the reductions in SO2 and NOx (precursors of the atmospheric acids with which ammonia reacts) that caused less binding and thus less chemical removal of ammonia (smaller loss – higher lifetime). On the other hand, the majority of the emissions persisted because ammonia mainly originates from agriculture, a primary production sector that was influenced very little by the lockdown restrictions. Despite the projected drop in various atmospheric aerosols and trace gases, PM2.5 levels stayed unchanged or even increased in Europe due to a number of reasons that were attributed to the complicated system. Higher water vapour during the European lockdowns favoured more sulfate production from SO2 and OH (gas phase) or O3 (aqueous phase). Ammonia first reacted with sulfuric acid, also producing sulfate. Then, the continuously accumulating free ammonia reacted with nitric acid, shifting the equilibrium reaction towards particulate nitrate. In high-free-ammonia atmospheric conditions such as those in Europe during the 2020 lockdowns, a small reduction in NOx levels drives faster oxidation toward nitrate and slower deposition of total inorganic nitrate, causing high secondary PM2.5 levels.

2025

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